Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015794304.1_cds_XP_016437946.1_3279
CDS Infomation

[gene=LOC107763946] [db_xref=GeneID:107763946] [protein=putative proline-rich receptor-like protein kinase PERK6] [protein_id=XP_016437946.1] [location=complement(join(80557..80805,81114..81275,81411..81552,81668..81744,81841..81911,81995..82081,82181..82738,82964..83912))] [gbkey=CDS]
Sequence

ATGTCTTCATCATCTAAGGATGATCAATCATCCAATTCGCCACCTTCAGATTCATCCTCT
TCGGATTCTTCATCAAATTCACCGCCATCATCCTCATCTGGTTCACCCCCTTCACCTTCA
TCCTCTTCAAATTCCCCATCGTCTGACTCATCATCAAATTCTCCGCCATCCCAAGATAAT
TCATCTTCATCGAATGATTCAAATTCCCAATCTCCCCCTTCTCAAAGTAATTCATCACCT
TCTCCGCCATCTGGGGATAGTAATAACTCATCTTCTTCCGGGGATAATAACAACGGCAAT
AATAACAACAACATTGACAATAGCAACGGGAACAACAACAATAACAACGGCAACAACAAT
GGGAACAACAGCAGCAATCACAACAACAATGACAATAATAGTAATAATAACAACAACAAT
GGAAACAACAACGGCAACAACAACAACAATGGTAATAACAACGGTAACAACAACAACAAC
AATGGTGATAGCAACAACGACAACAACAATGATAACAAGAACAACAACAACAATAATGGG
AGCAATAACAACGGCAATAGCAACAACAATAACAATAATGATCATAGCAACACTAACAAT
AATAATAACAATAAATCTTCACCTCCATCAAAATCCTCAAATTCAAATGGTGGTTCGCCG
CCTCCTCCACCCCCACCACCTCCTCCACCACCACCACCACCATCTCCCTTTTCTCCCAAC
TCTGGAGCTCTTTCCCCTCCGAAGCATAAGTCGCCACCGAGCAAGTCGGACGTAGATCAT
AATGGCAAATCTAACGATAACGGGACAGCCATCATTGTAGGAGTTGCTGCAGGAGCAGGA
CTATTACTTCTTGTCATGCTAGTCTTCCTTATATCTTGTTGCAAACGCAAAAGGAGAAGG
CCACGTGACCAAATGGGCTACTACAGGGACAATTCTCATGGAGGCAAGAGTACTGACTAC
TATAATAGTGGACAATATGGGAATTGGCACAACAACAAAGTTCAATCTACTGAACATATG
GTAAAGATGCCTACTCCTCAACCTGTCAGTACTAATGTAAGTTCAGAACTCAGTTGGCCA
ATAGCACCTCCACCACCACCTCCAATGATGAGCAGCAGTGAAATGAGTTCTGCTGCTTTC
TCTGGTCCACATCAACCTCCATTGCCACCTCCACATCCATCAATGGCTCTTGGTTTTAAC
CAAAGCAGTTTCACGTATGACGATTTGTCAGCAGCAACTGGAGGATTTTCTAAGGCCAAT
CTTTTGGGACAAGGTGGTTTTGGATTTGTACATAAAGGGGTGTTGCCTAATGGTAAGGAG
ATAGCAGTGAAAAGTCTGAAAGCAAATAGTGGGCAAGGGGAACGAGAATTTCAAGCTGAG
GTCGAGATCATTAGTCGTGTCCATCATCGCCATCTTGTATCTTTAGTTGGATATTGCATT
GCTGGATCTCAAAGGTTGTTGGTGTATGAGTTTGTTCCTAATGGCACTCTTGAATATCAC
CTTCATGGACCTGGTCGCCCAGTTATGGACTTCCCTACGAGGCTTAAAATTGCACTTGGA
TCTGCCAAAGGTTTTGCCTACCTTCATGAAGATTGCCACCCTCGCATCATTCACAGAGAC
ATTAAAGCTGCAAATATCCTACTGGACCATAACTGTGAAGCTAAGGTGGCTGATTTTGGA
CTAGCTAAGCTTTCCTCAGACACTAATACACATGTGTCAACACGTATCATGGGTACCTTT
GGGTACTTGGCACCAGAATACGCTTCAAGTGGCAAGCTAACTGAAAAGTCAGACGTTTAT
TCTTATGGTGTTATGCTTTTGGAACTTATAACTGGGCGTCGTCCTATCGACATTAACAGT
GATGATGACACCTTAGTTGAGTGGGCTAGGCCAATTCTGGTTCGTGCAACAGAGGGCGGA
AACTATGATGAATTGATAGATCCACGTTTGGAGGGAAATTTTGATGCCCAAGAGATGCTA
TGTATGGTGGCTTGTGCTGCTGCATCCATCAGACATTCTGCAAGAAGACGTCCAAAAATG
AGTCAGATTGTACGTGCTTTGGAAGGTGATGTTTCTCTGGATGATTTGAACGAGGGAATG
AAAAAGAGCCATAGCGCAATGTTTGGTTCTGGTGAAAGTTCCGAATACGACGGAGGTTCA
TATGACGTTAAAAAGTTCAGGAAATCTGGAATGTCGAGCCAAGAATTCACAGGCAGTGAA
CATGGTACTACTGGTGAATTTGTCCATTCCGCTGGTGAATCTCAAGAACTTCGTCACAAA
AAACTCAGTCCTTGA

Peptide Sequence

PEP ID

XP_016437946.1
PEP Infomation

PREDICTED: putative proline-rich receptor-like protein kinase PERK6 [Nicotiana tabacum]
Sequence

MSSSSKDDQSSNSPPSDSSSSDSSSNSPPSSSSGSPPSPSSSSNSPSSDSSSNSPPSQDN
SSSSNDSNSQSPPSQSNSSPSPPSGDSNNSSSSGDNNNGNNNNNIDNSNGNNNNNNGNNN
GNNSSNHNNNDNNSNNNNNNGNNNGNNNNNGNNNGNNNNNNGDSNNDNNNDNKNNNNNNG
SNNNGNSNNNNNNDHSNTNNNNNNKSSPPSKSSNSNGGSPPPPPPPPPPPPPPPSPFSPN
SGALSPPKHKSPPSKSDVDHNGKSNDNGTAIIVGVAAGAGLLLLVMLVFLISCCKRKRRR
PRDQMGYYRDNSHGGKSTDYYNSGQYGNWHNNKVQSTEHMVKMPTPQPVSTNVSSELSWP
IAPPPPPPMMSSSEMSSAAFSGPHQPPLPPPHPSMALGFNQSSFTYDDLSAATGGFSKAN
LLGQGGFGFVHKGVLPNGKEIAVKSLKANSGQGEREFQAEVEIISRVHHRHLVSLVGYCI
AGSQRLLVYEFVPNGTLEYHLHGPGRPVMDFPTRLKIALGSAKGFAYLHEDCHPRIIHRD
IKAANILLDHNCEAKVADFGLAKLSSDTNTHVSTRIMGTFGYLAPEYASSGKLTEKSDVY
SYGVMLLELITGRRPIDINSDDDTLVEWARPILVRATEGGNYDELIDPRLEGNFDAQEML
CMVACAAASIRHSARRRPKMSQIVRALEGDVSLDDLNEGMKKSHSAMFGSGESSEYDGGS
YDVKKFRKSGMSSQEFTGSEHGTTGEFVHSAGESQELRHKKLSP

Transcript Sequence

Gene sequence data has not been registered.